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- name: auto CI
- on:
- push:
- branches: [ master, release]
- pull_request:
- branches: [ master, release ]
- # schedule:
- # - cron: "0 2 * * 1-5"
- jobs:
- build:
- strategy:
- matrix:
- config:
- # - { os: windows-latest, suffix: 'zip' }
- - { os: ubuntu-latest, suffix: 'tar.gz', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- r-version: ['4.1.1']
- runs-on: ${{ matrix.config.os }}
- name: ${{ matrix.config.os }} (${{ matrix.r-version }})
- env:
- R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
- RSPM: ${{ matrix.config.rspm }}
- GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
- R_KEEP_PKG_SOURCE: yes
- # R_LIBS_USER:
- steps:
- - uses: actions/checkout@v3
- - name: Set up R ${{ matrix.r-version }}
- uses: r-lib/actions/setup-r@v2
- with:
- r-version: ${{ matrix.r-version }}
- use-public-rspm: true
- # http-user-agent: ${{ matrix.config.http-user-agent }}
- # - uses: r-lib/actions/setup-pandoc@v1
- - name: Set RENV_PATHS_ROOT
- shell: bash
- run: |
- echo "RENV_PATHS_ROOT=${{ runner.temp }}/renv" >> $GITHUB_ENV
- - name: Install and activate renv
- run: |
- install.packages("renv")
- renv::activate()
- shell: Rscript {0}
- - name: Get R and OS version
- id: get-version
- run: |
- cat("##[set-output name=os-version;]", sessionInfo()$running, "\n", sep = "")
- cat("##[set-output name=r-version;]", R.Version()$version.string, sep = "")
- shell: Rscript {0}
-
- - name: Restore Renv package cache
- uses: actions/cache@v3
- with:
- path: ${{ env.RENV_PATHS_ROOT }}
- key: ${{ steps.get-version.outputs.os-version }}-${{ steps.get-version.outputs.r-version }}-${{ inputs.cache-version }}-${{ hashFiles('renv.lock') }}
- restore-keys: ${{ steps.get-version.outputs.os-version }}-${{ steps.get-version.outputs.r-version }}-${{inputs.cache-version }}-
-
- - name: Install Linux build tools
- if: startsWith(runner.os, 'Linux')
- run: |
- sudo apt update
- sudo apt upgrade
- sudo apt install build-essential libcurl4-openssl-dev libbz2-dev liblzma-dev libfontconfig1-dev libharfbuzz-dev libfribidi-dev libfreetype6-dev libpng-dev libtiff5-dev libjpeg-dev libxml2-dev libssl-dev libgtk-3-dev libzmq3-dev
- - name: Install dependencies
- run: |
- install.packages(c("devtools", "remotes"))
- saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
- writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
- shell: Rscript {0}
- # - name: Check
- # run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error")
- # shell: Rscript {0}
- # - name: Build src pkg
- # run: |
- # devtools::build()
- # shell: Rscript {0}
- - name: Build bin pkg
- run: |
- devtools::build(binary = TRUE)
- shell: Rscript {0}
- - name: List all file
- run: |
- cd ..
- tree
-
- # - name: Upload Release Asset
- # uses: svenstaro/upload-release-action@v2
- # with:
- # repo_token: ${{ secrets.GITHUB_TOKEN }}
- # file: '../*.${{ matrix.config.suffix }}'
- # file_glob: true
- # tag: bioc_${{ env.bioc_ver}}
- # overwrite: true
- # body: "This is my release text"
- # - name: Release
- # uses: ncipollo/release-action@v1
- # with:
- # tag: ${{ env.APP_VERSION }}
- # name: ${{ env.APP_VERSION }}
- # token: ${{ secrets.GITHUB_TOKEN }}
- # artifacts: '**.*.tar.gz,**.*.zip'
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